Job Description P43319 Confidence 1.66% Date Thu Jan 5 12:02:15 GMT 2012 Rank 33 Aligned Residues 120 % Identity 11% Template d1jmma_ SCOP info Supersandwich V-region of surface antigen I/II (SA I/II, PAC) V-region of surface antigen I/II (SA I/II, PAC) Resolution 2.40

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		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		I	N	Q	G	D	V	I	K	V	N	F	G	F	I	N	G	Q	K	F	T	T	R	N	A	M	P	D	G	F	T	P	V	D	F	D	I	T	Y	D	C	G	D	T	S	K	I	K	N	S	.	L	Q	M	R	I	D	G	T	T	G	V	V	D	Q	Y	N	L	V	A	R	R	R	S	S	D	N	V	P	D	V
Query Conservation																																																			.
Alig confidence																									.	.	.	.	.																						.
Template Conservation																									.	.	.	.	.
Template Sequence		L	E	R	G	Q	S	A	T	A	T	Y	T	N	L	Q	N	S	Y	Y	N	G	K	K	.	.	.	.	.	I	S	K	I	V	Y	K	Y	T	V	D	P	K	S	K	F	Q	G	Q	K	V	W	L	G	I	F	T	D	P	T	L	G	V	F	A	S	A	Y	T	G	Q	V	E	K	N	T	S	I	F	I	K	N
Template Known Secondary structure				T	T											S	S				T	T			.	.	.	.	.												T	T				S	S	S								S	S	G	G	G									S	S		B	S	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.						.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		G	I	R	I	E	N	L	G	G	G	V	A	N	I	P	F	Q	N	G	I	L	P	V	D	P	S	G	H	G	T	V	N	M	R	A	.	.	.	.	W	P	V	N	L	V	G	G	E	L	E
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		E	F	T	F	Y	D	E	D	G	K	P	I	N	F	D	N	A	L	L	S	V	A	S	L	N	R	E	H	N	S	I	E	X	A	K	D	Y	S	G	K	F	V	K	I	S	G	S	S	I	G
Template Known Secondary structure								T	T	S		B															B		S	S							S		S	S					B	T	T		S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions