Job Description P43319 Confidence 0.92% Date Thu Jan 5 12:02:15 GMT 2012 Rank 77 Aligned Residues 68 % Identity 19% Template d1aym1_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 2.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	S	R	Y	G	P	V	N	I	G	A	N	T	T	F	T	L	Y	V	T	K	P	F	L	G	S	M	T	I	P	K	T	D	I	A	V	I	K	G	A	W	V	D	G	M	G	S	P	S	T	G	D	F	H	D	L	V	K	L	S	I	Q	G	N	L	T	A
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		P	T	T	R	D	D	Y	A	W	Q	S	G	T	N	A	S	V	F	W	Q	H	G	Q	P	F	P	.	R	F	S	L	P	F	L	S	I	A	S	A	Y	Y	M	F	Y	D	G	Y	D	G	D	T	Y	K	S	R	Y	G	T	V	V	T	N	D	M	G	T	L	C	S
Template Known Secondary structure			S	S	T	T		G	G	G	G		S	S	S							T	T	S				.									S	S	S	S			S					B	S	S	S	S	T	T			B	S	T	T	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions