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Job DescriptionP43319
Confidence2.18%DateThu Jan 5 12:02:15 GMT 2012
Rank25Aligned Residues31
% Identity29%Templatec1p65A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:nucleocapsid protein; PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv)
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40
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Query Sequence  LLLISTSCAYASSGGCGADSTSGATNYSSVV
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Template Sequence  LCLSSIQTAFNQGAGTCTLSDSGRISYTVEF
Template Known Secondary structure  T
S
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   23......30.........40.........50...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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