Job Description P43319 Confidence 99.92% Date Thu Jan 5 12:02:15 GMT 2012 Rank 2 Aligned Residues 277 % Identity 13% Template c1klfP_ PDB info PDB header:chaperone/adhesin complex Chain: P: PDB Molecule:fimh protein; PDBTitle: fimh adhesin-fimc chaperone complex with d-mannose Resolution 2.79 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	A	D	S	T	S	G	A	T	N	Y	S	S	V	V	D	D	V	T	V	N	Q	T	D	N	V	T	G	R	E	F	T	S	A	T	L	S	S	T	N	W	Q	Y	A	C	S	C	S	A	G	K	A	V	K	L	V	Y	M	V	S	P	V	L	T	T	T	G	H	Q	T	G	Y	Y	K	L	N	D	S	L
Query Conservation
Alig confidence																																		.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		C	K	T	A	N	G	T	A	I	P	I	G	G	G	S	A	N	V	Y	V	N	L	A	P	V	V	N	V	G	Q	N	L	.	.	.	.	V	V	D	L	S	T	Q	I	F	C	H	N	D	Y	P	E	T	I	T	D	Y	V	T	L	Q	R	G	S	A	Y	G	G	V	L	S	N	F	S	G	T	V	K	Y	S
Template Known Secondary structure					T	T	S					T	T						B						S	B			T	T	S			.	.	.	.					T	T	T						S	S	T	T	T																											S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	K	T	T	L	Q	A	N	D	I	P	G	L	T	T	D	Q	V	V	S	V	N	T	R	F	T	Q	I	K	N	N	T	V	Y	S	A	A	T	Q	T	G	V	C	Q	G	D	T	S	R	Y	G	P	V	N	I	G	A	N	T	T	F	T	L	Y	V	T	K	P	F	L	G	S	M	T	I	P	K	T	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	S	Y	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	T	S	E	T	P	R	V	V	Y	N	S	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	P	W	P	V	A	L	Y	L	T	P	V	S	S	A	G	G	V	A	I	K	A	G
Template Known Secondary structure		S	S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S										S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T			S					S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.																			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	I	K	G	A	W	V	D	G	M	G	S	P	S	T	G	D	F	H	D	L	V	K	L	S	I	Q	G	N	L	T	A	P	Q	S	C	K	I	N	Q	G	D	V	I	K	V	N	F	G	F	I	N	G	Q	K	F	T	T	R	N	A	M	P	D	G	F	T	P	V	D	F	D	I	T	Y	D	C	G
Query Conservation
Alig confidence																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		S	L	I	A	V	L	I	L	R	Q	T	N	N	Y	N	S	D	D	F	Q	F	V	W	N	I	Y	A	N	N	D	V	V	V	P	T	G	G	C	D	V	S	A	.	R	D	V	T	V	T	L	P	D	Y	P	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	I	P	L	T	V	Y	C	.
Template Known Secondary structure														S	S	S	S												S	S														.		S							S	S	S		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Predicted Secondary structure																																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.															.	180	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	S	K	I	K	N	S	L	Q	M	R	I	D	G	T	T	G	V	V	D	Q	Y	N	L	V	A	R	R	R	S	S	D	N	V	P	D	V	G	I	R	I	E	N	L	G	G	G	V	A	N	I	P	F	Q	N	G	I	L	P	V	D	P	S	G	H	G	T	V	N	M	R	A	W	P	V	N	L	V	G
Query Conservation
Alig confidence		.	.	.																						.																				.																	.																.
Template Conservation		.	.	.																						.																				.																	.																.
Template Sequence		.	.	.	A	K	S	Q	N	L	G	Y	Y	L	S	G	T	T	A	D	A	G	N	S	I	.	F	T	N	T	A	S	F	S	P	A	Q	G	V	G	V	Q	L	T	R	.	N	G	T	I	I	P	A	N	N	T	V	S	L	G	A	V	.	G	T	S	A	V	S	L	G	L	T	A	N	Y	A	R	.	T	G
Template Known Secondary structure		.	.	.	S	S												B	S	S	S	S	S		S	.	B						S	S			S	S								.	T	T					T	T									.	S	S	S						B							.		S
Template Predicted Secondary structure		.	.	.																						.																				.																	.																.
Template SS confidence
					188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	E	T	G	K	F	Q	G	T	A	T	I	T	V	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	V	T	A	G	N	V	Q	S	I	I	G	V	T	F	V	Y	Q
Template Known Secondary structure		S				S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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