Job Description P77432 Confidence 69.27% Date Thu Jan 5 12:29:13 GMT 2012 Rank 168 Aligned Residues 64 % Identity 19% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		14	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		L	M	A	L	D	A	G	.	.	.	.	.	T	G	S	I	R	A	V	I	F	D	L	E	G	N	Q	I	A	V	G	Q	A	E	W	R	H	L	A	V	P	D	V	P	G	S	M	E	F	D	L	N	K	N	W	Q	L	A	C	E	C	M	R	Q	A	L	H	N	A	G	I	A	P	E	Y	I	A	A	V	S
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	.	.	.	.	.	.	.	.	.	.	.	.	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	.	.	.	N	A	I	G	I	N
Template Known Secondary structure								T	T			T	T	T	T									T	T	S										S		T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	S																	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.													.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.				.	810	.	.	.	.
		89	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	N	P
Template Known Secondary structure			S	S	T
Template Predicted Secondary structure
Template SS confidence
		815	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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