Return to main results Retrieve Phyre Job Id

Job DescriptionP77432
Confidence21.35%DateThu Jan 5 12:29:13 GMT 2012
Rank222Aligned Residues35
% Identity34%Templatec3h0gE_
PDB info PDB header:transcriptionChain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210.........220.........230.........240.......
Predicted Secondary structure 

























Query SS confidence 










































Query Sequence  PALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPV
Query Conservation     
   

    

 
       
 
    
   

  
 

Alig confidence 
















........

















Template Conservation     
        


 
........   



 
 
 
 
 

Template Sequence  KELLDRYKLRETQLPRI. . . . . . . . QLADPVARYLGLKRGEVV
Template Known Secondary structure  T


TTTS


........
TT
T

TT
Template Predicted Secondary structure 





........









Template SS confidence 










































   157..160.........170... ......180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions