Job Description P77432 Confidence 100.00% Date Thu Jan 5 12:29:13 GMT 2012 Rank 7 Aligned Residues 497 % Identity 21% Template c3gg4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	Y	L	M	A	L	D	A	G	T	G	S	I	R	A	V	I	F	D	L	E	G	N	Q	I	A	V	G	Q	A	E	W	R	H	L	A	V	P	D	V	P	G	S	M	E	F	D	L	N	K	N	W	Q	L	A	C	E	C	M	R	Q	A	L	H	N	A	G	I	A	P	E	Y	I	A	A	V	S	A	C
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		A	S	Y	F	I	G	V	D	V	G	T	G	S	A	R	A	G	V	F	D	L	Q	G	R	X	V	G	Q	A	S	R	E	I	T	X	F	K	.	.	P	K	A	D	F	V	E	Q	S	S	E	N	I	W	Q	A	V	C	N	A	V	R	D	A	V	N	Q	A	D	I	N	P	I	Q	V	K	G	L	G	F	D
Template Known Secondary structure												S	S									T	T														B		.	.	S	S	T	T																									T			G	G	G
Template Predicted Secondary structure																																							.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.			.																																	.
Query SS confidence																		.	.	.	.	.	.	.	.	.			.																																	.
Query Sequence		S	M	R	E	G	I	V	L	Y	N	N	E	G	A	P	I	.	.	.	.	.	.	.	.	.	W	A	.	C	A	N	V	D	A	R	A	A	R	E	V	S	E	L	K	E	L	H	N	N	T	F	E	N	E	V	Y	R	A	T	G	.	Q	T	L	A	L	S	A	I	P	R	L	L	W	L	A	H	H	R	S
Query Conservation																		.	.	.	.	.	.	.	.	.			.																																	.
Alig confidence					.													.	.	.	.	.	.	.	.	.			.																					.	.	.	.	.								.
Template Conservation					.																																													.	.	.	.	.
Template Sequence		A	T	C	.	S	L	V	V	L	D	K	E	G	N	P	L	T	V	S	P	S	G	R	N	E	Q	N	V	I	V	W	X	D	H	R	A	I	T	Q	A	E	R	I	N	A	T	K	H	.	.	.	.	.	P	V	L	E	F	V	G	G	V	I	S	P	E	X	Q	T	P	K	L	L	W	L	K	Q	H	X	P
Template Known Secondary structure				S	.							T	T	S		B				S	T	T			T	T						T	T			T	T											T		.	.	.	.	.	G	G	G	G	G	G	T	T				T	T	S
Template Predicted Secondary structure					.																																													.	.	.	.	.
Template SS confidence
		80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.									.	230	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.
Query Sequence		D	I	Y	R	Q	A	S	T	I	T	M	I	S	D	W	L	A	Y	M	L	S	G	E	L	A	V	D	P	S	N	A	G	T	T	G	L	L	D	L	T	T	R	D	W	K	P	A	L	L	D	M	A	G	L	R	A	D	I	L	S	P	V	K	E	T	G	T	L	L	.	.	.	.	.	.	.	.	G	V	V
Query Conservation																																																																							.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	W	S	N	V	G	H	L	F	D	L	P	D	F	L	T	W	R	A	T	K	D	E	T	R	S	L	C	S	T	V	C	K	W	T	Y	L	G	H	E	D	R	W	D	P	S	Y	F	K	L	V	G	L	A	D	L	L	D	N	N	A	A	K	I	G	A	T	V	K	P	X	G	A	P	L	G	H	G	L
Template Known Secondary structure																							S													S			B	T	T	T	T	B										T		G	G	G	G					T	T	T		S					T	T		B		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	A	A	E	L	C	G	L	K	A	G	T	P	V	V	V	G	G	G	D	V	Q	L	G	C	L	G	L	G	V	V	R	P	A	Q	T	A	V	L	G	G	T	F	W	Q	Q	V	V	N	L	A	A	P	V	T	D	P	E	M	N	V	R	V	N	P	H	V	I	P	G	M	V	Q	A	E	S	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	R	A	A	S	E	X	G	L	I	P	G	T	A	V	S	V	S	I	I	D	A	H	A	G	T	I	G	I	L	G	A	S	D	R	R	I	A	L	I	G	G	T	S	T	A	H	X	A	X	S	R	S	A	H	F	I	S	G	I	W	G	P	Y	Y	S	A	I	L	P	E	Y	W	L	N	E	G	G	Q
Template Known Secondary structure										T			T	T				B														T	T											S	S	S								S	S					T	T	S						T	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350								.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																						.	.																				.	.	.	.	.	.	.								.	.
Query SS confidence																						.	.																				.	.	.	.	.	.	.								.	.
Query Sequence		F	F	T	G	L	T	M	R	W	F	R	D	A	F	C	A	E	E	K	L	.	.	I	A	E	R	L	G	I	D	T	Y	T	L	L	E	E	M	A	S	R	.	.	.	.	.	.	.	V	P	P	G	S	W	G	.	.	V	M	P	I	F	S	D	R	M	R	F	K	T	W	Y	H	A	A	P	S	F	I	N
Query Conservation																						.	.																				.	.	.	.	.	.	.								.	.
Alig confidence																						.	.																				.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		S	A	T	G	A	L	I	D	H	I	I	Q	S	H	P	C	Y	P	A	L	L	E	Q	A	K	N	K	G	E	T	I	Y	E	A	L	N	Y	I	L	R	Q	X	A	G	E	P	E	N	I	A	F	L	T	N	D	I	H	X	L	P	Y	F	H	G	N	R	S	P	R	A	N	P	N	L	T	G	I	I	T	G
Template Known Secondary structure		S		S											S	T	T											T	T																S	S	G	G	G	S	G	G	G	G	T	T							T	T		B		T	T	T		B	T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	D	P	D	K	C	N	K	A	T	L	F	R	A	L	E	E	N	A	A	I	V	S	A	C	N	L	Q	Q	I	A	D	F	S	N	I	H	P	S	S	L	V	F	A	G	G	G	S	K	G	K	L	W	S	Q	I	L	A	D	V	S	G	L	P	V	N	I	P	V	V	K	E	A	T	A	L	G	C
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		L	K	L	S	T	T	P	E	D	X	A	L	R	Y	L	A	T	I	Q	A	L	A	L	G	T	R	H	I	I	E	T	X	N	Q	.	N	G	Y	N	I	D	T	X	X	A	S	G	G	G	T	K	N	P	I	F	V	Q	E	H	A	N	A	T	G	C	A	X	L	L	P	E	E	S	E	A	X	L	L	G	S
Template Known Secondary structure				S			S																												T	.	T	T											T	T	T	T													T	S						S	S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.		.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		A	I	A	A	G	V	G	A	G	I	F	S	S	M	A	E	T	G	E	R	L	V	R	W	E	R	T	H	T	P	D	P	E	K	H	E	.	L	Y	Q	D	S	R	D	K	W	Q	A	V	Y	Q	D	Q	L	G	L	V
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	X	X	G	T	V	A	A	G	V	F	E	S	L	P	E	A	X	A	A	X	S	R	I	G	K	T	V	T	P	Q	T	N	K	I	K	A	Y	Y	D	R	K	Y	R	V	F	H	Q	X	Y	H	D	H	X	R	Y	Q
Template Known Secondary structure									T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.