Job Description P77432 Confidence 100.00% Date Thu Jan 5 12:29:13 GMT 2012 Rank 9 Aligned Residues 485 % Identity 23% Template c3g25B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: 1.9 angstrom crystal structure of glycerol kinase (glpk) from2 staphylococcus aureus in complex with glycerol. Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	K	Y	Y	L	M	A	L	D	A	G	T	G	S	I	R	A	V	I	F	D	L	E	G	N	Q	I	A	V	G	Q	A	E	W	R	H	L	A	V	P	D	V	P	G	S	M	E	F	D	L	N	K	N	W	Q	L	A	C	E	C	M	R	Q	A	L	H	N	A	G	I	A	P	E	Y	I	A	A	V	S
Query Conservation
Alig confidence																																									.	.
Template Conservation																																									.	.
Template Sequence		A	X	E	K	Y	I	L	S	I	D	Q	G	T	T	S	S	R	A	I	L	F	N	Q	K	G	E	I	A	G	V	A	Q	R	E	F	K	Q	Y	F	.	.	P	Q	S	G	W	V	E	H	D	A	N	E	I	W	T	S	V	L	A	V	X	T	E	V	I	N	E	N	D	V	R	A	D	Q	I	A	G	I	G
Template Known Secondary structure														S	S									T	T	S													B		.	.		S	T	T																								S	S			G	G	G
Template Predicted Secondary structure																																									.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																.							.																																	.
Query SS confidence																.							.																																	.
Query Sequence		A	C	S	M	R	E	G	I	V	L	Y	N	N	E	.	G	A	P	I	W	A	.	C	A	N	V	D	A	R	A	A	R	E	V	S	E	L	K	E	L	H	N	N	T	F	E	N	E	V	Y	R	A	T	G	.	Q	T	L	A	L	S	A	I	P	R	L	L	W	L	A	H	H	R	S	D	I	Y	R	Q	A
Query Conservation																.							.																																	.
Alig confidence																.							.																					.	.	.										.
Template Conservation																																												.	.	.
Template Sequence		I	T	N	Q	R	E	T	T	V	V	W	D	K	H	T	G	R	P	I	Y	H	A	I	V	W	Q	S	R	Q	T	Q	S	I	C	S	E	L	K	Q	Q	G	Y	.	.	.	E	Q	T	F	R	D	K	T	G	L	L	L	D	P	Y	F	A	G	T	K	V	K	W	I	L	D	N	V	E	G	A	R	E	K	A
Template Known Secondary structure						S	S							T	T	T			B	S	S					T	T			T	T										T	T		.	.	.									S			S	S	T	T	S												S	T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		166	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																.	.
Query SS confidence				.	.	.	.																.	.
Query Sequence		S	T	.	.	.	.	I	T	M	I	S	D	W	L	A	Y	M	L	S	G	E	.	.	L	A	V	D	P	S	N	A	G	T	T	G	L	L	D	L	T	T	R	D	W	K	P	A	L	L	D	M	A	G	L	R	A	D	I	L	S	P	V	K	E	T	G	T	L	L	G	V	V	S	S	Q	A	A	E	L	C
Query Conservation				.	.	.	.																.	.
Alig confidence				.	.	.	.																.	.																																																		.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		E	N	G	D	L	L	F	G	T	I	D	T	W	L	V	W	K	L	S	G	K	A	A	H	I	T	D	Y	S	N	A	S	R	T	L	X	F	N	I	H	D	L	E	W	D	D	E	L	L	E	L	L	T	V	P	K	N	X	L	P	E	V	K	A	S	S	E	V	Y	G	K	T	.	.	.	.	I	D	Y	H
Template Known Secondary structure			T	T																T	T	T											T	T	S	S	S			T	T	T	T										T	T			G	G	G							S								.	.	.	.		G	G	G
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																								.												.	.
Query SS confidence																																																								.												.	.
Query Sequence		G	L	K	A	G	T	P	V	V	V	G	G	G	D	V	Q	L	G	C	L	G	L	G	V	V	R	P	A	Q	T	A	V	L	G	G	T	F	W	Q	Q	V	V	N	L	A	A	P	V	T	D	P	E	M	N	.	V	R	V	N	P	H	V	I	P	G	M	.	.	V	Q	A	E	S	I	S	F	F	T	G	L
Query Conservation																																																								.												.	.
Alig confidence																																																								.												.	.
Template Conservation
Template Sequence		F	Y	G	Q	E	V	P	I	A	G	V	A	G	D	Q	Q	A	A	L	F	G	Q	A	C	F	E	R	G	D	V	K	N	T	Y	G	T	G	G	F	X	L	X	N	T	G	D	K	A	V	K	S	E	S	G	L	L	T	T	I	A	Y	G	I	D	G	K	V	N	Y	A	L	E	G	S	I	F	V	S	G	S
Template Known Secondary structure		T	T	T																			T	T			S	T	T							S	S	S								T	T	S					S	S	S										T	T											S		S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		T	M	R	W	F	R	D	A	F	C	A	E	E	K	L	I	A	E	R	L	G	I	D	T	Y	T	L	L	E	E	M	A	S	R	V	P	P	G	S	W	G	.	.	V	M	P	I	F	S	D	R	M	R	F	K	T	W	Y	H	A	A	P	S	F	I	N	L	S	I	D	P	D	K	C	N	K	A	T	L	F
Query Conservation																																											.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																			.	.																												.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Sequence		A	I	Q	W	L	R	D	G	L	R	X	I	.	.	.	.	.	.	.	.	.	.	.	N	S	A	P	Q	S	E	S	Y	A	T	R	V	D	S	T	E	G	V	Y	V	V	P	A	F	V	G	L	G	T	P	Y	W	D	S	E	A	R	G	A	I	F	G	L	T	R	G	.	.	.	T	E	K	E	H	F	I
Template Known Secondary structure									T	S				.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G							T	S	S			T	T							T	T		B		T	T	T		B	T	T										T	T	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.												.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	E	E	N	A	A	I	V	S	A	C	N	L	Q	Q	I	A	D	F	S	N	I	H	P	S	S	L	V	F	A	G	G	G	S	K	G	K	L	W	S	Q	I	L	A	D	V	S	G	L	P	V	N	I	P	V	V	K	E	A	T	A	L	G	C	A	I	A	A	G	V	G	A	G	I	F	S	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	T	L	E	S	L	C	Y	Q	T	R	D	V	X	E	A	X	S	K	D	S	G	I	D	V	Q	S	L	R	V	D	G	G	A	V	K	N	N	F	I	X	Q	F	Q	A	D	I	V	N	T	S	V	E	R	P	E	I	Q	E	T	T	A	L	G	A	A	F	L	A	G	L	A	V	G	F	W	E	S	K
Template Known Secondary structure																												S						S	G	G	G	G													T	S						S																	T	T	S	S	S		T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	G	E	R	L	V	R	W	E	R	T	H	T	P	D	P	E	K	H	E	L	Y	Q	D	S	R	D	K	W	Q	A	V	Y	Q	D	Q	L	G	L	V	D	H
Query Conservation
Alig confidence									.															.
Template Conservation									.															.
Template Sequence		D	D	I	A	K	N	W	.	K	L	E	E	K	F	D	P	K	X	D	E	G	E	.	R	E	K	L	Y	R	G	W	K	K	A	V	E	A	T	Q	V	F	K	T	E
Template Known Secondary structure									.										S					.
Template Predicted Secondary structure									.															.
Template SS confidence
		457	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.		.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.