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Job DescriptionP77432
Confidence100.00%DateThu Jan 5 12:29:13 GMT 2012
Rank10Aligned Residues471
% Identity25%Templatec2nlxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:xylulose kinase; PDBTitle: crystal structure of the apo e. coli xylulose kinase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  LMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMR
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Template Sequence  YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSR. . PHPLWSEQDPEQWWQATDRAMKALGDQHSL. . QDVKALGIAGQM
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SS
TTS



B
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S
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   2.......10.........20.........30..... ....40.........50.........60..... ....70.......
 
   94.....100........ .110.........120.........130.........140 .........150.........160.........170.
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Query Sequence  EGIVLYNNEGAPIWA. CANVDARAAREVSELKELHNNTFENEVYRATG. QTLALSAIPRLLWLAHHRSDIYRQASTITMI
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Template Sequence  HGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVP. . . . . QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLP
Template Known Secondary structure  S
B
TTS
B
S

TT

TT
T.....T
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TTS
T


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   78.80.........90.........100.........110... ......120.........130.........140.........150..
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  SDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGG
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Template Sequence  KDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMA. TVPVVAGG
Template Known Secondary structure  S

TTT
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   153......160.........170.........180.........190.........200.........210.........220... ......230.
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  GDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKL
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Template Sequence  GDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLS. . .
Template Known Secondary structure  T

STTSSS
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TTTT

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TTTTT

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   232.......240.........250.........260.........270.........280.........290.........300........
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  IAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQ
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Template Sequence  . . . . . . . . NVPALIAAAQQADESAEPVWFL. . . . . . PYLSPQAKGVFFGLTHQ. . . HGPNELARAVLEGVGYALADGMDV
Template Known Secondary structure  ........STT

TTS


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   309310.........320.........330 .........340....... ..350.........360.........370.
 
   412.......420.........430.........440.........450.... .....460.........470.........480.........490
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Query Sequence  IADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKE. ATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTP
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Template Sequence  VHA. CGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL. PLEQSHLP
Template Known Secondary structure  T.TT


SSGGG



S
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   380.. .......390.........400.........410.........420.........430.........440......... 450.......
 
   491........500.........510......
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Query Sequence  DPEKHELYQDSRDKWQAVYQDQLGLV
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Template Sequence  DAQRYAAYQPRRETFRRLYQQLLPLM
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GGGT
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   458.460.........470.........480...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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