Job Description P77432 Confidence 100.00% Date Thu Jan 5 12:29:13 GMT 2012 Rank 5 Aligned Residues 484 % Identity 24% Template c2d4wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	L	M	A	L	D	A	G	T	G	S	I	R	A	V	I	F	D	L	E	G	N	Q	I	A	V	G	Q	A	E	W	R	H	L	A	V	P	D	V	P	G	S	M	E	F	D	L	N	K	N	W	Q	L	A	C	E	C	M	R	Q	A	L	H	N	A	G	I	A	P	E	Y	I	A	A	V	S	A	C	S
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		D	Y	V	L	A	I	D	Q	G	T	T	S	S	R	A	I	V	F	D	H	S	G	E	I	Y	S	T	G	Q	L	E	H	D	Q	I	F	.	.	P	R	A	G	W	V	E	H	N	P	E	Q	I	W	N	N	V	R	E	V	V	G	L	A	L	T	R	G	N	L	T	H	E	D	I	A	A	V	G	I	T	N
Template Known Secondary structure											S	S									T	T	S													B		.	.	S	S	T	T																								T	T			G	G	G
Template Predicted Secondary structure																																						.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure												.								.																																	.																												.
Query SS confidence												.								.																																	.																												.
Query Sequence		M	R	E	G	I	V	L	Y	N	N	.	E	G	A	P	I	W	A	.	C	A	N	V	D	A	R	A	A	R	E	V	S	E	L	K	E	L	H	N	N	T	F	E	N	E	V	Y	R	A	T	G	.	Q	T	L	A	L	S	A	I	P	R	L	L	W	L	A	H	H	R	S	D	I	Y	R	Q	A	S	T	.
Query Conservation												.								.																																	.																												.
Alig confidence												.								.																					.	.	.										.																												.
Template Conservation																																									.	.	.
Template Sequence		Q	R	E	T	A	V	V	W	D	K	T	T	G	K	P	V	Y	N	A	I	V	W	Q	D	T	R	T	Q	K	I	V	D	E	L	G	G	D	E	G	.	.	.	A	E	K	Y	K	S	I	V	G	L	P	L	A	T	Y	F	S	G	P	K	I	K	W	I	L	D	N	V	E	G	A	R	E	K	A	E	K	G
Template Known Secondary structure			S	S		B					T	T	T			B	S	S					T	T			T	T										S	S		.	.	.	G	G	G	G					S			S		T	T	S												S	T	T								T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
					168	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.	.
Query SS confidence		.	.	.																.	.	.	.	.
Query Sequence		.	.	.	I	T	M	I	S	D	W	L	A	Y	M	L	S	G	E	.	.	.	.	.	L	A	V	D	P	S	N	A	G	T	T	G	L	L	D	L	T	T	R	D	W	K	P	A	L	L	D	M	A	G	L	R	A	D	I	L	S	P	V	K	E	T	G	T	L	L	G	V	V	S	S	Q	A	A	E	L	C
Query Conservation		.	.	.																.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.																																																				.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		D	L	L	F	G	N	T	D	T	W	V	L	W	N	M	T	G	G	T	E	G	G	V	H	V	T	D	V	T	N	A	S	R	T	M	L	M	D	L	D	T	L	S	W	R	E	D	I	A	A	D	M	G	I	P	L	S	M	L	P	D	I	R	S	S	S	E	V	Y	G	H	G	R	P	.	.	.	.	.	R
Template Known Secondary structure																	T	T	T	T	T	T											T	T	T	T				T	T	T	T										T	T			G	G	G	S						S									T	.	.	.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		G	L	K	A	G	T	P	V	V	V	G	G	G	D	V	Q	L	G	C	L	G	L	G	V	V	R	P	A	Q	T	A	V	L	G	G	T	F	W	Q	Q	V	V	N	L	A	A	P	V	T	D	P	E	M	N	V	R	.	.	.	.	V	N	P	H	V	I	P	G	M	V	Q	A	E	S	I	S	F	F	T	G
Query Conservation																																																										.	.	.	.
Alig confidence																																																										.	.	.	.
Template Conservation
Template Sequence		G	L	V	P	G	V	P	I	A	G	I	L	G	D	Q	Q	A	A	T	F	G	Q	A	C	F	E	V	G	Q	A	K	N	T	Y	G	T	G	N	F	L	L	L	N	T	G	T	E	K	V	M	S	K	N	G	L	L	T	T	V	C	Y	K	I	G	D	A	P	A	V	Y	A	L	E	G	S	I	A	V	T	G
Template Known Secondary structure		S	S	S	T	T																	T	T			S	T	T							S	S	S								T	T	S					S	S	S										T	T	S											S		S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	T	M	R	W	F	R	D	A	F	C	A	E	E	K	L	I	A	E	R	L	G	I	D	T	Y	T	L	L	E	E	M	A	S	R	V	P	P	G	S	W	G	.	V	M	P	I	F	S	D	R	M	R	F	K	T	W	Y	H	A	A	P	S	F	I	N	L	S	I	D	P	D	K	C	N	K	A	T	L	F
Query Conservation																																												.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																		.																												.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Sequence		S	L	V	Q	W	L	R	D	N	L	G	M	F	E	D	.	.	.	.	.	.	.	.	.	.	A	P	D	V	E	W	L	A	G	K	V	Q	D	N	G	G	A	Y	F	V	P	A	F	S	G	L	F	A	P	Y	W	R	P	D	A	R	G	A	L	V	G	L	T	R	Y	.	.	.	V	N	R	N	H	I	A
Template Known Secondary structure										T	T		T	T	T	T	.	.	.	.	.	.	.	.	.	.		S		T					T	T	S	S	S		T	T						T	T				S	T	T	T					S									S	S	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.											.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	E	E	N	A	A	I	V	S	A	C	N	L	Q	Q	I	A	D	F	S	N	I	H	P	S	S	L	V	F	A	G	G	G	S	K	G	K	L	W	S	Q	I	L	A	D	V	S	G	L	P	V	N	I	P	V	V	K	E	A	T	A	L	G	C	A	I	A	A	G	V	G	A	G	I	F	S	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	A	L	E	A	T	A	F	Q	S	R	E	V	V	D	A	M	N	A	D	S	G	V	D	L	T	E	L	R	V	D	G	G	M	V	A	N	E	L	L	M	Q	F	Q	A	D	Q	L	G	V	D	V	V	R	P	K	V	A	E	T	T	A	L	G	A	A	Y	A	A	G	I	A	V	G	F	W	K	G	E
Template Known Secondary structure																								S										S	G	G	G	G													T	S						S		S																T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	G	E	R	L	V	R	W	E	R	T	H	T	P	D	P	E	K	H	E	L	Y	Q	D	S	R	D	K	W	Q	A	V	Y	Q	D	Q	L	G	L	V	D	H	G	L
Query Conservation
Alig confidence											.													.
Template Conservation											.													.
Template Sequence		Q	D	V	I	D	N	W	A	E	.	D	K	R	W	S	P	S	M	E	S	G	E	.	R	E	R	L	Y	R	N	W	K	K	A	V	T	K	T	M	E	W	V	D	E	D	V
Template Known Secondary structure											.								S					.																					T
Template Predicted Secondary structure											.													.
Template SS confidence
		460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.