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Job DescriptionP77432
Confidence100.00%DateThu Jan 5 12:29:13 GMT 2012
Rank12Aligned Residues475
% Identity25%Templatec1glbG_
PDB info PDB header:phosphotransferaseChain: G: PDB Molecule:glycerol kinase; PDBTitle: structure of the regulatory complex of escherichia coli iiiglc with2 glycerol kinase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  YYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACS
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Template Sequence  KYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIY. . PKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN
Template Known Secondary structure 

SS
SS




B
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   4.....10.........20.........30......... 40.........50.........60.........70.........80.
 
   92.......100.. ...... .110.........120.........130.........140 .........150.........160.......
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Query Sequence  MREGIVLYNNE. GAPIWA. CANVDARAAREVSELKELHNNTFENEVYRATG. QTLALSAIPRLLWLAHHRSDIYRQAST.
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Template Sequence  QRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGL. . . EDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRG
Template Known Secondary structure 
SS
TTT

BSS

SS

TTTT
...S

SSTTSSSSSTT
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   82.......90.........100.........110.........120 .........130.........140.........150........
 
   168.170.........180.. .......190.........200.........210.........220.........230.........240..
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Query Sequence  . . . ITMISDWLAYMLSGE. . LAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLK
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Template Sequence  ELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQ. . . . . . . . . . . T
Template Known Secondary structure  STTTS


TTSSTTTT
SSTTTTTT

TTSS


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   159160.........170.........180.........190.........200.........210.........220...... .
 
   243......250.........260.........270.........280.........290.........300... ......310.........
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Query Sequence  AGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPG. . . MVQAESISFFTGLTMR
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Template Sequence  NIIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQ
Template Known Secondary structure 


TT

STT
SSST




SSS

TTS
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   320.........330.........340.........350....... ..360.........370.........380.........390.......
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Query Sequence  WFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWG. . VMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRAL
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Template Sequence  WLRDEMKLI. . . . . . . . . . . NDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRG. . . VNANHIIRAT
Template Known Secondary structure  TS
S
...........SSSTTTTSS
TT


TT
BTTTT
BTT





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   315....320... ......330.........340.........350.........360.........370 .........380
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  EENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAET
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Template Sequence  LESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL
Template Known Secondary structure  S



SSGGG
TS
S


TTSS
SGGGS
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   381........390.........400.........410.........420.........430.........440.........450.........460
 
   478.480.........490.........500.........510........
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Query Sequence  GERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDH
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Template Sequence  QEKA. VIEREFRPGIETTERNY. RYAGWKKAVKRAMAWEEH
Template Known Secondary structure  STT
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GGGGT.TT
S

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   461... .....470.........480. ........490.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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