Job Description P27832 Confidence 99.44% Date Thu Jan 5 11:44:09 GMT 2012 Rank 104 Aligned Residues 119 % Identity 24% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	V	V	A	Q	E	T	D	I	P	A	L	R	Q	L	A	S	A	A	F	A	Q	S	R	F	R	A	P	W	Y	A	P	D	A	S	S	R	F	Y	A	Q	W	I	E	N	A	V	R	G	T	F	D	H	Q	C	L	I	L	R	A	A	S	G	D	I	R	G	Y	V	S	L	R	E	L	N	A	T	D
Query Conservation
Alig confidence																																.	.	.	.	.	.	.																									.
Template Conservation																																.	.	.	.	.	.	.																									.
Template Sequence		P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	.	.	.	.	.	.	.	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	.	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E
Template Known Secondary structure		G	G						G	G	G															T	T					.	.	.	.	.	.	.															G	G	G								.		T	T														T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
													163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	R	I	G	L	L	A	G	R	G	A	G	A	E	L	M	Q	T	A	L	N	W	A	Y	A	R	G	K	T	T	L	R	V	A	T	Q	M	G	N	T	A	A	L	K	R	Y	I	Q	S	G	A	N	V	E	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		Y	G	G	L	R	G	F	V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G
Template Known Secondary structure		T	T													G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions