Job Description P27832 Confidence 26.24% Date Thu Jan 5 11:44:09 GMT 2012 Rank 176 Aligned Residues 115 % Identity 5% Template c1p4nA_ PDB info PDB header:ligase Chain: A: PDB Molecule:femx; PDBTitle: crystal structure of weissella viridescens femx:udp-murnac-2 pentapeptide complex Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		Q	E	T	D	I	P	A	L	R	Q	L	A	S	A	A	F	A	Q	S	R	F	R	A	P	W	Y	A	P	D	A	S	S	R	F	Y	A	Q	W	I	E	N	A	V	R	G	T	F	D	H	Q	C	L	I	L	R	A	A	S	G	D	I	R	G	Y	V	S	L	R	E	L	N	A	T	D	A	R	I	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																										.	.	.	.	.	.													.	.	.																																	.	.	.
Template Conservation																										.	.	.	.	.	.													.	.	.
Template Sequence		S	A	T	E	L	D	E	F	F	K	T	Y	T	T	M	A	E	R	H	G	I	T	H	R	.	.	.	.	.	.	P	I	E	Y	F	Q	R	M	Q	A	A	F	.	.	.	D	A	D	T	M	R	I	F	V	A	E	R	E	G	K	L	L	S	T	G	I	A	L	K	Y	G	R	K	I	W	Y	M	Y	A	G
Template Known Secondary structure		S																			T					.	.	.	.	.	.												S	.	.	.		T	T	T									T	T												T	T
Template Predicted Secondary structure																										.	.	.	.	.	.													.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.																																.	.	.
Query SS confidence		.																																.	.	.
Query Sequence		.	G	L	L	A	G	R	G	A	G	A	E	L	M	Q	T	A	L	N	W	A	Y	A	R	G	K	T	T	L	R	V	A	.	.	.	T	Q	M	G	N	T	A	A	L	K	R	Y	I	Q	S	G
Query Conservation		.																																.	.	.
Alig confidence		.																																.	.	.
Template Conservation
Template Sequence		S	M	D	G	N	T	Y	Y	A	P	Y	A	V	Q	S	E	M	I	Q	W	A	L	D	T	N	T	D	L	Y	D	L	G	G	I	E	S	E	S	T	D	D	S	L	Y	V	F	K	H	V	F	V
Template Known Secondary structure				S	S			T	T																T	T		S								S		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions