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Job DescriptionP37641
Confidence100.00%DateThu Jan 5 11:56:14 GMT 2012
Rank3Aligned Residues291
% Identity16%Templatec3fzjC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: tsar low resolution crystal structure, tetragonal form
Resolution7.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELD
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Template Sequence  MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQ
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Query Sequence  GLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPV. . . DILHDGFDCVIRTGALPEDGVIARP
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Template Sequence  EEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEA
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  LGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLG
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Template Sequence  QPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYG. . LPEPKLGLVCESFLALPGVVAHSDL
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   161........170.........180.........190.........200.........210... ......220.........230........
 
   238.240.........250.........260.........270.........280.........290...
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Query Sequence  IIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGV
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Template Sequence  LTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHH
Template Known Secondary structure  SSTTGGG


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   239240.........250.........260.........270.........280.........290....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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