Job Description P37641 Confidence 99.73% Date Thu Jan 5 11:56:14 GMT 2012 Rank 22 Aligned Residues 202 % Identity 22% Template c3fd3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein; PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58. Resolution 1.70 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.															.
Query SS confidence																															.															.
Query Sequence		S	G	K	L	R	I	D	I	P	P	G	I	A	K	S	L	L	L	P	R	L	S	E	F	L	Y	L	H	P	.	G	I	E	L	E	L	S	S	H	D	R	P	V	D	.	I	L	H	D	G	F	D	C	V	I	R	T	G	A	L	P	E	D	G	V	I	A	R	P	L	G	K	L	T	M	V	N	C	A	S
Query Conservation																															.															.
Alig confidence																															.															.
Template Conservation
Template Sequence		R	V	T	L	N	I	A	T	N	A	D	S	L	G	T	W	F	L	D	A	V	S	K	F	T	G	G	S	D	Y	L	V	N	I	A	V	D	D	Q	D	H	T	V	E	W	L	R	G	G	R	V	L	A	A	V	T	A	H	D	K	P	V	Q	G	C	R	V	T	P	L	G	V	L	R	Y	H	A	T	A	S
Template Known Secondary structure															T	T	T											T	S	S										S	S								T	T	S		S					S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		169	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		P	H	Y	.	L	T	R	F	G	Y	P	Q	S	P	D	D	L	T	S	H	A	I	V	R	Y	T	P	H	L	G	V	H	P	L	G	F	E	V	A	S	V	N	G	V	Q	W	F	K	S	G	G	M	L	T	V	N	S	S	E	N	Y	L	T	A	G	L	A	G	L	G	I	I	Q	I	P	R	I	A	V	R
Query Conservation					.
Alig confidence					.																							.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		P	D	F	X	A	R	H	F	A	D	G	V	T	P	A	A	L	A	R	A	P	G	L	T	F	N	.	.	.	.	Q	K	D	R	L	Q	A	S	W	I	R	T	A	L	G	E	D	V	S	Y	P	T	H	W	L	P	S	T	D	G	F	V	K	A	S	L	A	G	X	G	W	G	L	N	P	V	Q	L	V	A
Template Known Secondary structure										T	T		S						T	T	S					S	S	.	.	.	.	T	T													S	S																					T	T	S		B
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	R	A	G	R	L	I	E	V	L	P	G	Y	R	A	E	P	L	S	L	S	L	V	Y	P	Q	R	R	E	L	S	R	R	V	N	L	F	M	Q	W	L	A	G	V	M	K	E	Y	L	D
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		E	H	L	A	A	G	R	L	V	E	L	X	P	G	.	.	.	T	P	L	D	I	P	L	Y	W	Q	V	N	R	L	A	A	E	R	L	A	G	L	T	A	N	X	V	G	T	A	R	V	V	L	X
Template Known Secondary structure							T	S	S			S	S	T	T	.	.	.													T	T	T	T	T	T	T															S	B
Template Predicted Secondary structure																.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions