Job Description P37641 Confidence 99.75% Date Thu Jan 5 11:56:14 GMT 2012 Rank 18 Aligned Residues 197 % Identity 14% Template c2hxrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism Resolution 2.05 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		K	L	R	I	D	I	P	P	G	I	A	K	S	L	L	L	P	R	L	S	E	F	L	Y	L	H	P	G	I	E	L	E	L	S	S	H	D	R	P	V	D	.	.	.	I	L	H	D	G	F	D	C	V	I	R	T	G	A	L	P	E	D	G	V	I	A	R	P	L	G	K	L	T	M	V	N	C	A	S	P
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		S	L	R	I	A	V	T	P	T	F	T	S	Y	F	I	G	P	L	X	A	D	F	Y	A	R	Y	P	S	I	T	L	Q	L	Q	E	X	S	Q	E	K	I	E	D	X	L	C	R	D	E	L	D	V	G	I	A	F	A	P	V	H	S	P	E	L	E	A	I	P	L	L	T	E	S	L	A	L	V	V	A	Q
Template Known Secondary structure													T	T	T													T	T	S																		T	T	S		S						S	S				T	T																	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	T	R	F	G	Y	P	Q	S	P	D	D	L	T	S	H	A	I	V	R	Y	T	P	H	L	G	V	H	P	L	G	F	E	V	A	S	V	N	G	V	Q	W	F	K	S	G	G	M	L	T	V	N	S	S	E	N	Y	L	T	A	G	L	A	G	L	G	I	I	Q	I	P	R	I	A	V	R	E	A
Query Conservation
Alig confidence																																										.	.	.
Template Conservation																																										.	.	.
Template Sequence		H	H	P	L	A	V	H	E	Q	V	A	L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	T	R	E	Q	I	D	H	Y	C	E	K	A	.	.	.	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T	S	L	S	T	L	L	P	A	A	I	A	T	Q	H
Template Known Secondary structure		T	S	G	G	G	G		S				G	G	G	G	G	G								T	T	S													T	.	.	.	T										S												S	S		B					T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	G	R	L	I	E	V	L	P	G	Y	R	A	E	P	L	S	L	S	L	V	Y	P	Q	R	R	E	L	S	R	R	V	N	L	F	M	Q	W	L	A	G	V	M	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	D	G	L	K	A	I	S	L	A	P	P	L	L	E	R	T	A	V	L	L	R	R	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	X	A	L	D	K	C	A
Template Known Secondary structure		.	.	.	T	T							S	S		S											T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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