 |
Job Description | P37641 | Confidence | 97.48% | Date | Thu Jan 5 11:56:14 GMT 2012 |
Rank | 56 | Aligned Residues | 77 |
% Identity | 19% | Template | c2fxaB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:protease production regulatory protein hpr; |
PDBTitle: structure of the protease production regulatory protein hpr from2 bacillus subtilis.
|
Resolution | 2.40 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | H | A | M | Q | L | F | I | K | V | A | E | L | E | . |
. |
S | F | S | R | A | A | D | F | F | A | L | P | K | G | S | V | S | R | Q | I | Q | A | L | E | H | Q | L | G | T | Q | L | L | Q | R | T | T | R | R | . |
. |
. |
. |
. |
V | K | L | T | P | E | G | M | T | Y | Y | Q | R | A | K | D | V | L | S | N |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |
|   |   |   |
| . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |
| . | . | . | . | . |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |
|
|   | . |   |
|
|
|   |
|   |   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
N | I | N | E | H | H | I | L | W | I | A | Y | Q | L | N | G | A | S | I | S | E | I | A | K | F | G | V | X | H | V | S | T | A | F | N | F | S | K | K | L | E | E | . |
R | G | Y | L | R | F | S | K | R | L | N | D | K | R | N | T | Y | V | Q | L | T | E | E | G | T | E | V | F | W | S | L | L | E | E | F | D | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T | S |  |  |  |  |
|
| T | T |
| T | T |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
  |   |
76 | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
L | S | E | L | D |
Query Conservation |   |
  |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
Template Sequence |   |
T | R | N | A | V |
Template Known Secondary structure |   |
G | G |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
124 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|