 |
Job Description | Q47129 | Confidence | 97.30% | Date | Thu Jan 5 12:36:13 GMT 2012 |
Rank | 39 | Aligned Residues | 74 |
% Identity | 5% | Template | d2f4pa1 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| TM1287-like
|
Resolution | 1.90 |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | L | K | L | S | T | V | T | T | S | G | V | N | L | S | R | T | W | Q | E | V | K | G | S | D | D | A | W | F | Y | T | V | F | Q | L | S | G | Q | A | I | M | E | Q | D | E | R | . |
Q | V | Q | I | G | A | G | D | I | T | L | L | D | A | S | R | P | C | S | L | Y | W | Q | E | S | S | K | Q | I | S | L | L |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |
Template Sequence |   |
F | N | T | Q | V | Y | D | V | V | F | E | P | G | A | R | T | H | . |
. |
. |
. |
. |
. |
W | H | S | H | P | G | G | Q | I | L | I | V | T | R | G | K | G | F | Y | Q | E | R | G | K | P | A | R | I | L | K | K | G | D | V | V | E | I | P | P | N | V | V | H | W | H | G | A | A | P | D | E | E | L | V | H | I | G |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  |
| T | T |
|  |  |
| . | . | . | . | . | . | S |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  | B | T | T | B |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
  |   |
121 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
I |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
108 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|