Return to main results Retrieve Phyre Job Id

Job DescriptionQ47129
Confidence97.95%DateThu Jan 5 12:36:13 GMT 2012
Rank18Aligned Residues85
% Identity18%Templated1yhfa1
SCOP infoDouble-stranded beta-helix RmlC-like cupins TM1287-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  GVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQES
Query Conservation              
           
              
     
       
    
  
                  
Alig confidence 




















......




















































Template Conservation      
       
    
  
......  
  
 
     
 

 
            
  

    
    
 
 
   
Template Sequence  LSRTLVQRQDLGITVFSLDKG. . . . . . QEIGRHSSPGDAXVTILSGLAEITIDQETYRVAEGQTIVXPAGIPHALYAVEA
Template Known Secondary structure  TT
TT......


SSSTTTT

TTS
SS
Template Predicted Secondary structure 





......






















Template SS confidence 















































































   27..30.........40....... ..50.........60.........70.........80.........90.........100
 
   114.....120....
Predicted Secondary structure 

Query SS confidence 










Query Sequence  SKQISLLLPRT
Query Conservation       
     
Alig confidence 










Template Conservation     
       
Template Sequence  FQXLLVVVKPE
Template Known Secondary structure 
S
Template Predicted Secondary structure 



Template SS confidence 










   101........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions