 |
Job Description | Q47129 | Confidence | 81.94% | Date | Thu Jan 5 12:36:13 GMT 2012 |
Rank | 289 | Aligned Residues | 47 |
% Identity | 15% | Template | d1jhfa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| LexA repressor, N-terminal DNA-binding domain
|
Resolution | 1.80 |
|
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
. | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | V | Q | P | R | R | E | R | Q | F | Q | K | V | V | T | L | I | D | D | N | I | R | E | E | I | L | R | P | E | W | I | A | G | E | T | G | M | . |
S | V | R | S | L | Y | R | M | F | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   | . |
|   |   |   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
| . | . |
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
K | A | L | T | A | R | Q | Q | E | V | F | D | L | I | R | D | H | I | S | Q | T | G | M | P | P | . |
. |
T | R | A | E | I | A | Q | R | L | G | F | R | S | P | N | A | A | E | E | H | L | K | A |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
| . | . |
|  |  |  |  |  |  |  | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|