Job Description Q47129 Confidence 69.26% Date Thu Jan 5 12:36:13 GMT 2012 Rank 334 Aligned Residues 143 % Identity 17% Template c3la2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:global nitrogen regulator; PDBTitle: crystal structure of ntca in complex with 2-oxoglutarate Resolution 2.60 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.				90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																.	.	.					.	.	.									.	.	.	.	.
Query SS confidence																.	.	.					.	.	.									.	.	.	.	.
Query Sequence		Y	T	V	F	Q	L	S	G	Q	A	I	M	E	Q	.	.	.	D	E	R	Q	.	.	.	V	Q	I	G	A	G	D	I	.	.	.	.	.	T	L	L	D	A	S	R	P	C	S	L	Y	W	Q	E	S	S	K	Q	I	S	L	L	L	P	R	T	L	L	E	Q	Y	F	P	H	Q	K	P	I	C	A	E	R
Query Conservation																.	.	.					.	.	.									.	.	.	.	.
Alig confidence																.	.	.					.	.	.									.	.	.	.	.																																								.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	V	Y	F	L	L	K	G	A	V	K	L	S	R	V	Y	E	A	G	E	E	I	T	V	A	L	L	R	E	N	S	V	F	G	V	L	S	L	L	T	G	N	K	S	D	R	F	Y	H	A	V	A	F	T	P	V	E	L	L	S	A	P	I	E	Q	V	E	Q	A	L	K	E	N	P	E	L	.	.	.	.
Template Known Secondary structure									S									T	T	S										T	T					T					T	G	G	G	S	B								S	S	S																						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	D	L	P	M	V	Q	L	S	H	R	L	L	Q	E	S	M	N	N	P	A	L	S	E	T	E	S	E	A	A	L	Q	A	M	V	C	L	L	R	P	V	L	H	Q	R	E	S	V	Q	P	R	R	E	R	Q	F	Q	K	V	V	T	L	I	D	D	N	I	R	E	E	I	L	R	P	E	W	I	A
Query Conservation
Alig confidence		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	M	L	M	L	R	G	L	S	S	R	I	L	Q	T	E	M	M	I	E	T	L	A	H	R	D	M	G	S	R	L	V	S	F	L	L	I	L	C	R	D	F	G	V	P	C	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	I	D	L	K	L	S	H	Q	A	I	A
Template Known Secondary structure		.	.																									S	S																					S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure		.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																	.	.	170	.	.	.	.	.	.	.	.	.	180
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	G	M	S	V	R	S	L	Y	R	M	F	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I	G	S	T	R	V	T	V	T	R	L	L	G	D
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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