Job Description Q47129 Confidence 40.15% Date Thu Jan 5 12:36:13 GMT 2012 Rank 481 Aligned Residues 56 % Identity 7% Template c3fymA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus Resolution 1.00 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	L	R	P	E	W	I	A	G	E	T	G	M	S	V	R	S	L	Y	R	M	F	A	D	.	K	G	L	V	V	A	Q	Y	I	R	N	R	R	L	D	F	C	A	D	A	I	R	H	A	A	D	D	E	K	L	A	G	I	G	F	H	W
Query Conservation																										.
Alig confidence																										.																						.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		G	M	T	L	T	E	L	E	Q	R	T	G	I	K	R	E	M	L	V	H	I	E	N	N	E	F	D	Q	L	P	N	K	N	Y	S	E	G	F	I	R	K	Y	A	S	V	V	.	.	.	.	.	N	I	E	P	N	Q	L	I	Q	A	H
Template Known Secondary structure		T																						T	T		G	G	G	S	S	S	G	G	G												T	.	.	.	.	.	T										T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		1016	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.						.	.	.	.	.	.	.	.	1070	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions