Job Description Q47129 Confidence 49.78% Date Thu Jan 5 12:36:13 GMT 2012 Rank 432 Aligned Residues 133 % Identity 14% Template c3fx3A_ PDB info PDB header:camp-binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: structure of a putative camp-binding regulatory protein from2 silicibacter pomeroyi dss-3 Resolution 2.20 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																		.	.	.	.	.	.											.	.	.
Query SS confidence																		.	.	.	.	.	.											.	.	.
Query Sequence		Y	T	V	F	Q	L	S	G	Q	A	I	M	E	Q	D	E	.	.	.	.	.	.	R	Q	V	Q	I	G	A	G	D	I	.	.	.	T	L	L	D	A	S	R	P	C	S	L	Y	W	Q	E	S	S	K	Q	I	S	L	L	L	P	R	T	L	L	E	Q	Y	F	P	H	Q	K	P	I	C	A	E	R	L	D
Query Conservation																		.	.	.	.	.	.											.	.	.
Alig confidence																		.	.	.	.	.	.											.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	H	V	V	I	D	G	W	V	K	L	F	R	X	T	P	T	G	S	E	A	V	V	S	V	F	T	R	G	E	S	F	G	E	A	V	A	L	R	N	T	P	Y	P	V	S	A	E	A	V	T	P	C	E	V	X	H	I	P	S	P	V	F	V	S	L	X	R	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S									T	T	S										T	T											T				S	S					S	S	S																	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	D	L	P	M	V	Q	L	S	H	R	L	L	Q	E	S	M	N	N	P	A	L	S	E	T	E	S	E	A	A	L	Q	A	M	V	C	L	L	R	P	V	L	H	Q	.	R	E	S	V	Q	P	R	R	E	R	Q	F	Q	K	V	V	T	L	I	D	D	N	I	R	E	E	I	L	R	P	E	W	I	A	G
Query Conservation																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	P	E	I	C	I	S	I	L	A	T	T	F	G	H	L	H	S	L	V	A	Q	L	E	Q	L	K	A	Q	T	G	A	Q	R	V	A	E	F	L	L	E	L	C	D	C	E	V	T	L	P	Y	D	K	X	L	I	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				S		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	G	M	S	V	R	S	L	Y	R	M	F	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	G	X	K	P	E	S	L	S	R	A	F	S	R
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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