Job Description Q47129 Confidence 97.49% Date Thu Jan 5 12:36:13 GMT 2012 Rank 29 Aligned Residues 74 % Identity 9% Template c3d82A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	S	T	V	T	T	S	G	V	N	L	S	R	T	W	Q	E	V	K	G	S	D	D	.	A	W	F	Y	T	V	F	Q	L	S	G	Q	A	I	M	E	Q	D	E	R	Q	V	Q	I	G	A	G	D	I	T	L	L	D	A	S	R	P	C	S	L	Y	W	Q	E	S	S	K	Q	I	S	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	A	E	X	N	D	Y	Q	F	K	L	V	K	V	E	G	E	F	V	W	H	E	H	A	D	T	D	E	V	F	I	V	X	E	G	T	L	Q	I	A	F	R	D	Q	N	I	T	L	Q	A	G	E	X	Y	V	I	P	K	G	V	E	H	K	P	X	A	K	E	E	C	K	I	X	I	I
Template Known Secondary structure						T	T															B			T	T										S							S	S							T	T							T	T			B
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions