Return to main results Retrieve Phyre Job Id

Job DescriptionQ47129
Confidence87.36%DateThu Jan 5 12:36:13 GMT 2012
Rank238Aligned Residues41
% Identity15%Templatec3colB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of putative transcription regulator from2 lactobacillus plantarum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230....
Predicted Secondary structure 












Query SS confidence 









































Query Sequence  RRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMF
Query Conservation              
        

   

     
   
 
 
Alig confidence 

















.






















Template Conservation 

  

 

  
  
 
 .   

  

  



  


  
Template Sequence  KQVKIQDAVAAIILAEGP. AGVSTTKVAKRVGIAQSNVYLYF
Template Known Secondary structure 

G.GG

TS
TT
Template Predicted Secondary structure 


.









Template SS confidence 









































   8.10.........20..... ....30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions