Job Description Q47129 Confidence 96.47% Date Thu Jan 5 12:36:13 GMT 2012 Rank 71 Aligned Residues 86 % Identity 8% Template c2fqpD_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:hypothetical protein bp2299; PDBTitle: crystal structure of a cupin domain (bp2299) from bordetella pertussis2 tohama i at 1.80 a resolution Resolution 1.80 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																										.																	.	.
Query SS confidence																																										.																	.	.
Query Sequence		E	R	Y	T	G	V	L	D	T	H	F	A	K	G	L	K	L	S	T	V	T	T	S	G	V	N	L	S	R	T	W	Q	E	V	K	G	S	D	D	A	.	W	F	Y	T	V	F	Q	L	S	G	Q	A	I	M	E	Q	.	.	D	E	R	Q	V	Q	I	G	A	G	D	I	T	L	L	D	A	S	R	P	C
Query Conservation																																										.																	.	.
Alig confidence																											.	.	.	.	.	.										.																	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		R	P	G	A	I	P	T	V	Q	I	D	N	E	R	V	K	V	T	E	W	R	F	P	P	G	.	.	.	.	.	.	G	E	T	G	W	H	R	H	S	X	D	Y	V	V	V	P	X	T	T	G	P	L	L	L	E	T	P	E	G	S	V	T	S	Q	L	T	R	G	V	S	Y	T	R	P	E	G	V	E	H
Template Known Secondary structure				B										S	S										T	T	.	.	.	.	.	.		B			S					S							S	S									T	T									T	T							T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Y	W	Q	E	S	S	K	Q	I	S	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	I	N	P	S	D	T	E	F	V	F	V	E	I
Template Known Secondary structure							S	S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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