Return to main results Retrieve Phyre Job Id

Job DescriptionQ47129
Confidence46.58%DateThu Jan 5 12:36:13 GMT 2012
Rank451Aligned Residues40
% Identity15%Templatec2du9A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.... .....220.........230......
Predicted Secondary structure 






.......



Query SS confidence 

















. . . . . . .





















Query Sequence  QFQKVVTLIDDNIREEIL. . . . . . . RPEWIAGETGMSVRSLYRMFAD
Query Conservation          
        
.......
   

     
   
 
 
  
Alig confidence 

















.......





















Template Conservation   
 

   
   
  
 
  
  



 


    


 


 

  
Template Sequence  LYKQIASLIEDSIVDGTLSIDQRVPSTNELAAFHRINPATARNGLTL
Template Known Secondary structure  SSSS
TT


S


Template Predicted Secondary structure 














Template SS confidence 














































   5....10.........20.........30.........40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions