 |
Job Description | Q47129 | Confidence | 89.72% | Date | Thu Jan 5 12:36:13 GMT 2012 |
Rank | 174 | Aligned Residues | 43 |
% Identity | 9% | Template | c1zvvA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:glucose-resistance amylase regulator; |
PDBTitle: crystal structure of a ccpa-crh-dna complex
|
Resolution | 2.98 Å |
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | L | R | P | E | W | I | A | G | E | T | G | M | S | V | R | S | L | Y | R | M | F | A | D | . |
K | G | L | V | V | A | Q | Y | I | R | N | R | R | L | D | F | C | A | D | A | I |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   | . |   |
|   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|
|   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   | . | . | . |
|
|   |
|
|   |   |   |
|   |   |
|
Template Sequence |   |
M | N | V | T | I | Y | D | V | A | R | E | A | S | V | S | M | A | T | V | S | R | V | V | N | G | N | P | N | V | K | P | S | . |
. |
. |
T | R | K | K | V | L | E | T | I | E | R | L |
Template Known Secondary structure |   |
|
| S |
| S |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  | T |
| S |
| S |
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|