Job Description Q47129 Confidence 81.45% Date Thu Jan 5 12:36:13 GMT 2012 Rank 291 Aligned Residues 87 % Identity 10% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		Q	K	V	V	T	L	I	D	D	N	I	R	E	E	I	L	R	P	E	W	I	A	G	E	T	G	M	S	V	R	S	L	Y	R	M	F	A	D	K	G	L	V	V	A	Q	Y	.	.	.	.	.	.	.	I	R	N	R	R	L	D	F	C	A	D	A	I	R	H	A	A	D	D	E	K	L	A	G	I	G	F
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence														.																																		.	.	.	.	.	.	.																.	.
Template Conservation														.																																																								.	.
Template Sequence		D	T	E	R	A	Q	L	D	V	M	K	L	.	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	.	.	S	C	K	T	A	R	D	I	R	N
Template Known Secondary structure														.	T	T											T												S	G	G	G	T	T										S	S															.	.
Template Predicted Secondary structure														.																																																								.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.
		272	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		H	W	G	F	S	.	D	Q	S	H	F	S	T	V	F	K	Q	R
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		E	L	Q	L	S	A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure			T	T			S												T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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