Job Description Q47129 Confidence 90.86% Date Thu Jan 5 12:36:13 GMT 2012 Rank 134 Aligned Residues 78 % Identity 14% Template c1rktA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein yfir; PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis Resolution 1.95 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		R	E	R	Q	F	Q	K	V	V	T	L	I	D	D	N	I	R	E	E	I	L	R	P	E	W	I	A	G	E	T	G	M	S	V	R	S	L	Y	R	M	F	A	.	D	K	G	L	V	V	A	Q	Y	I	R	N	R	R	L	D	F	C	A	D	A	I	R	H	A	A	D	D	E	K	L	A	G	I	G	F	H
Query Conservation																																												.
Alig confidence																			.																									.					.
Template Conservation																			.																														.
Template Sequence		Q	A	E	I	L	E	A	A	K	T	V	F	K	R	K	G	F	.	E	L	T	T	X	K	D	V	V	E	E	S	G	F	S	R	G	G	V	Y	L	Y	F	S	S	T	E	E	X	.	F	R	R	I	I	E	T	G	L	D	E	G	L	R	K	L	D	K	S	A	E	H	Q	S	V	W	A	S	I	S	S	Y
Template Known Secondary structure																		S	.	T	T											T	S							T	T		S						.																				T	T	T	S
Template Predicted Secondary structure																			.																														.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		273
Predicted Secondary structure
Query SS confidence
Query Sequence		W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		92

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions