Return to main results Retrieve Phyre Job Id

Job DescriptionP36930
Confidence87.46%DateThu Jan 5 11:54:01 GMT 2012
Rank331Aligned Residues46
% Identity17%Templated2dk5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20. ........30.........40.........50....
Predicted Secondary structure 


..





Query SS confidence 












. .
































Query Sequence  RNKIIQLVNEQGT. . VLVQDLAGVFAASEATIRADLRFLEQKGVVTRF
Query Conservation     

  
     ..
 
 


    

  





  

  
 
 
 
Alig confidence 












..
































Template Conservation 
  

 

  

  


   
  

 
    
 



 

 
 


 
Template Sequence  EKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAV
Template Known Secondary structure 
TT
TT

TTS
Template Predicted Secondary structure 











Template SS confidence 















































   22.......30.........40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions