Job Description P36930 Confidence 97.10% Date Thu Jan 5 11:54:01 GMT 2012 Rank 94 Aligned Residues 79 % Identity 22% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.																						.						.	.
Query SS confidence																														.	.	.	.	.																						.						.	.
Query Sequence		N	S	F	E	R	R	N	K	I	I	Q	L	V	N	E	Q	G	T	V	L	V	Q	D	L	A	G	V	F	.	.	.	.	.	A	A	S	E	A	T	I	R	A	D	L	R	F	L	E	Q	K	G	V	V	T	.	R	F	H	G	G	.	.	A	A	K	I	M	S	G	N	S	E	T	E	T	Q	E	V	G	F
Query Conservation																														.	.	.	.	.																						.						.	.
Alig confidence																														.	.	.	.	.															.	.	.					.						.	.
Template Conservation																																																	.	.	.
Template Sequence		N	R	A	G	R	Q	A	R	I	V	A	I	L	S	S	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	G	I	E	V	T	Q	A	T	L	S	R	D	L	E	E	L	.	.	.	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V	S	G	G
Template Known Secondary structure																T					S											T	T														T	T	.	.	.	T							T	T	S	S										S						T	T	T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		76	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	R	F	Q	L	A	S	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	R	M	A	R	L	L	G	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions