Job Description P36930 Confidence 98.25% Date Thu Jan 5 11:54:01 GMT 2012 Rank 22 Aligned Residues 154 % Identity 24% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	R	F	Q	L	A	S	A	P	K	N	R	I	A	Q	A	A	V	K	M	I	H	E	G	M	T	V	I	L	D	S	G	S	T	T	M	L	I	A	E	G	L	M	T	A	K	N	I	T	V	I	T	N	S	L	P	A	A	F	A	L	S	E	N	K	D	I	T	L	V	V	C	G	G	T	V	R	H	K
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		K	E	F	I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	.	.	.	.	.	E	T
Template Known Secondary structure										T											T	T			T	T							S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T									.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	S	M	H	G	S	I	A	E	R	S	L	Q	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	D	L	M	F	V	G	A	D	G	I	D	A	V	N	G	I	T	T	F	N	E	G	Y	S	I	S	G	A	M	V	T	A	A	N	K	V	I	A	V	L	D	S	S	K	F
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	K	W	Q	G	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M	T	D	K	V	V	M	G	A	D	S	I	T	V	N	G	A	V	I	N	K	I	G	T	A	L	I	A	L	T	A	K	E	H	R	V	W	T	M	I	A	A	E	T	Y	K	F
Template Known Secondary structure		T	T	T	T												T	T								G	G	G	T	T	T	T	G	G	G		S							S				T	T							T	T											T	T									G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		219	220	.	.																																	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		N	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	Q	V	L	P	I	E	K	I	D	I	I	I	T	D	D	A	.	.	V	S	E	V	D	K	L	A	L	Q	K
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		H	P	E	T	M	L	G	Q	L	V	E	M	R	D	P	T	E	V	I	P	E	D	E	L	K	T	W	P	K	N	I	E	V	W	N	P	A	F	D	V	T	P	P	E	Y	V	D	V	I	I	T	E	R	G	I	I	P	P	Y	A	A	I	D	I	L	R	E
Template Known Secondary structure			S	S			T	T	T	T			B			G	G	G	T	S						T	T	S		S	S						B	S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions