Job Description P36930 Confidence 98.38% Date Thu Jan 5 11:54:01 GMT 2012 Rank 20 Aligned Residues 216 % Identity 13% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	R	R	N	K	I	I	Q	L	V	N	E	Q	G	T	V	L	V	Q	D	L	A	G	V	F	A	A	S	E	A	T	I	R	A	D	L	R	F	L	E	Q	K	G	V	V	T	R	F	H	G	G	A	A	K	I	M	S	G	N	S	E	T	E	T	Q	E	V	G	F	K	E	R	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		I	R	L	I	V	K	I	A	Q	L	Y	Y	E	Q	D	M	T	Q	A	Q	I	A	R	E	L	G	I	Y	R	T	T	I	S	R	L	L	K	R	G	R	E	Q	G	I	V	T	.	.	.	.	.	.	I	A	I	N	Y	D	Y	N	E	N	L	W	L	E	Q	Q	L	K	Q	K	F	G	L	K	E	A	V	V
Template Known Secondary structure															S												T			S													T	T	S	S		.	.	.	.	.	.					T	T																T		S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.																			.	.	.	.
Query SS confidence		.	.	.	.																			.	.	.	.
Query Sequence		.	.	.	.	F	Q	L	A	S	A	P	K	N	R	I	A	Q	A	A	V	K	M	.	.	.	.	I	H	E	G	M	T	V	I	L	D	S	G	S	T	T	M	L	I	A	E	G	L	M	T	A	K	N	I	T	V	I	T	N	S	L	P	A	A	F	A	L	S	E	N	K	D	I	T	L	V	V	C	G	G
Query Conservation		.	.	.	.																			.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	S	D	G	L	L	E	E	E	Q	L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	E	P	G	D	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	Q	R	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	Q	V	I	C	V	P	I	I	G
Template Known Secondary structure					S																									T	T								S									T					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	B
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																	.	.	.	.	.	.	140	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		T	V	R	H	K	T	R	S	M	H	G	.	.	S	I	A	E	R	S	L	Q	D	I	N	A	D	L	M	F	V	G	A	D	G	I	D	A	V	N	G	I	T	T	F	N	E	G	Y	S	I	S	G	A	M	V	T	A	A	N	K	V	I	A	V	L	D	S	S	K	F	N	R	R	G	F	N	Q	V	L	P
Query Conservation													.	.
Alig confidence													.	.																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	S	G	K	L	E	S	R	Y	H	V	N	T	L	T	Y	G	A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	.	.	.	.	.	.	.	.	.	.	A	L	V	G	I	G	S
Template Known Secondary structure		B		T	T	S	S		G	G	G														T								S	B	S	B		S										T	S											T	T				.	.	.	.	.	.	.	.	.	.						B
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	K	I	D	I	I	I	T	D	D	A	V	S	E	V	D	K	L	A	L	Q	K	T	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	I	R	D	G	A	N	W	H	A	F	Y	G	S	E	E	S	D	D	L	N	A	R	H	V
Template Known Secondary structure		T	T			S	S	S						T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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