Return to main results Retrieve Phyre Job Id

Job DescriptionP36930
Confidence97.96%DateThu Jan 5 11:54:01 GMT 2012
Rank31Aligned Residues63
% Identity17%Templatec1f5tA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: diphtheria tox repressor (c102d mutant) complexed with2 nickel and dtxr consensus binding sequence
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60...
Predicted Secondary structure 


















Query SS confidence 






























































Query Sequence  MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMS
Query Conservation 
 
   

   

  
     
 
 


    

  





  

  
 
 
  


     
Alig confidence 






























































Template Conservation 

   
 

  
  
           

  
 

  


  
  
   


 
     
 

 
Template Sequence  LVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTP
Template Known Secondary structure  SSSTT


BT

TTS
TTSB
Template Predicted Secondary structure 
























Template SS confidence 






























































   1004.....1010.........1020.........1030.........1040.........1050.........1060......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions