Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence98.34%DateThu Jan 5 11:32:13 GMT 2012
Rank103Aligned Residues126
% Identity25%Templated2p6ra4
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   438.440.........450.........460.........470.. .......480.......
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Query Sequence  IIEDIKERTAKGQPVLVGTISIEKSELVSNELTKA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIKHNVLNAKFHANE
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Template Sequence  FEELVEECVAENGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQ
Template Known Secondary structure  TT


SSTT


SSTT

STT


TTS
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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   488.490........ .500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  AAIVAQAGYPA. . AVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESR
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Template Sequence  RRVVEDAFRRGNIKVVVATPTLAAGVNLPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RRVIVRSLYRFDGYSKRIKV
Template Known Secondary structure  TTS


STTTSSS


B..............................S

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   311........320.........330.........340 .........350.........360
 
   566...570.........580.........590...
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Query Sequence  RIDNQLRGRSGRQGDAGSSRFYLSMEDA
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Template Sequence  SEYKQMAGRAGRPGMDERGEAIIIVGKR
Template Known Secondary structure  TTBS
TTT
S


GG
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   361........370.........380........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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