Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence97.31%DateThu Jan 5 11:32:13 GMT 2012
Rank134Aligned Residues116
% Identity17%Templated2fwra1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   433......440.........450.........460.........470.........480.........490.........500.........510..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  EKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTD
Query Conservation   
  

  

      







 


 

 

  
   

 
 




    





 

  














Alig confidence 











..
































...





























Template Conservation       
      ..    
 


                        ...   
      
      


 
     


Template Sequence  NKIRKLREILER. . HRKDKIIIFTRHNELVYRISKVFLIPAITHRTS. . . REEREEILEGFRTGRFRAIVSSQVLDEGID
Template Known Secondary structure  ..TSSS
B

B
S
TT

B

SSS
...STSS
SB
B
SS


SSS
Template Predicted Secondary structure  ..







...












Template SS confidence 















































































   335....340...... ...350.........360.........370......... 380.........390.........400.........
 
   513......520.........530.........540.........550.........560.........570.........580.........590
Predicted Secondary structure 



































Query SS confidence 













































































Query Sequence  IVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSM
Query Conservation 





                             
   
















 














 
 


Alig confidence 


.....................................





































Template Conservation 
  .....................................   

            
  

  
    
    
   
Template Sequence  VPD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ANVGVIMSGSGSAREYIQRLGRILRPSKGKKEAVLYEL
Template Known Secondary structure  S

.....................................BS

SS

SB


TTT

Template Predicted Secondary structure 


.....................................













Template SS confidence 













































































   410.. .......420.........430.........440.........450
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions