 |
Job Description | P10408 | Confidence | 37.50% | Date | Thu Jan 5 11:32:13 GMT 2012 |
Rank | 276 | Aligned Residues | 111 |
% Identity | 16% | Template | d1zh8a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.50 |
|
 |
  |   |
387 | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | |
|
|
. | . | . | . | . | 460 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | G | M | T | G | T | A | D | T | E | A | F | E | F | S | S | I | Y | K | L | D | T | V | V | V | P | T | N | R | P | M | I | R | K | D | L | P | D | L | V | Y | M | T | E | A | E | K | I | Q | A | I | I | E | D | I | K | E | R | T | A | K | G | Q | P | V | L | V | . |
. |
. |
G | T | I | S | I | E | K | S | E |
Query Conservation |   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|
| . | . | . |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |   |
|   | . | . |   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | T | A | V | T | S | R | T | R | S | H | A | E | E | F | A | K | X | V | G | N | P | A | V | F | . |
D | S | Y | E | E | L | L | E | S | G | L | V | D | A | V | D | L | T | L | P | V | E | L | N | L | . |
. |
P | F | I | E | K | A | L | R | K | G | V | H | V | I | C | E | K | P | I | S | T | D | V | E | T | G | K |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  | . | S |
|  |  |  |  |  |  | S | S |
|
| S |  |  |  |  |
|
|
| G | G | G |  |  | . | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S | S | S | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
  |   |
464 | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | |
|
|
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | S | N | E | L | T | K | A | G | I | K | H | N | V | L | N | A | K | F | . |
. |
. |
H | A | N | E | A | A | I | V | A | Q | A | G | Y | P | A | A | V |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   | . | . | . |   |   |   |
|
|
|
|
|
|   |
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
K | V | V | E | L | S | E | K | S | E | K | T | V | Y | I | A | E | N | F | R | E | N | S | Y | Q | K | E | F | E | D | F | Y | Q | V | V | A | E | G | K | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|