Job Description P10408 Confidence 97.37% Date Thu Jan 5 11:32:13 GMT 2012 Rank 131 Aligned Residues 110 % Identity 28% Template d1yksa2 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase Resolution 1.80

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		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	R	T	A	K	G	Q	P	V	L	V	G	T	I	S	I	E	K	S	E	L	V	S	N	E	L	T	K	A	G	I	K	H	N	V	L	N	A	K	F	H	A	N	E	A	A	I	V	A	Q	A	G	Y	P	A	A	V	T	I	A	T	N	M	A	G	R	G	T	D	I	V	L	G	G	S	W	Q	A	E
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		D	W	I	L	A	D	K	R	P	T	A	W	F	L	P	S	I	R	A	A	N	V	M	A	A	S	L	R	K	A	G	K	S	V	V	V	L	N	R	K	T	F	E	K	K	P	D	.	.	.	.	.	.	.	.	.	.	F	I	L	A	T	D	I	A	E	M	G	A	N	L	C	V	.	.	.	.	.	.	.
Template Known Secondary structure									S							S															T	T								S	S	S						S	.	.	.	.	.	.	.	.	.	.					S	S	S	T	T			T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400											.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.													.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		V	A	A	L	E	N	P	T	A	E	Q	I	E	K	I	K	A	D	W	Q	V	R	H	D	A	V	L	E	A	G	G	L	H	I	I	G	T	E	R	H	E	S	R	R	I	D	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	L	R	G	R	S	G	R	Q	.	G	D	A	G	S	S	R	F	Y	L	S
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	L	D	C	.	R	T	A	F	K	P	V	L	V	D	E	G	R	K	V	A	I	K	G	P	L	R	I	S	A	S	S	A	A	Q	R	R	G	R	I	G	R	N	P	N	R	D	G	D	S	Y	Y	Y	S	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						.										T	T	T	T																				T	T	S	S			T	T										S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
																									425	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		590	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	S	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions