Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence97.97%DateThu Jan 5 11:32:13 GMT 2012
Rank118Aligned Residues123
% Identity20%Templated1wp9a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90........ .100.........110.........120. ........130.........140.........150.........160
Predicted Secondary structure 




.




.













Query SS confidence 















.






















.






































Query Sequence  HFDVQLLGGMVLNERC. IAEMRTGEGKTLTATLPAYLNAL. TGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
Query Conservation    







 

 
 .



 










 
 



. 
 











 

 
 
  

  





 
   
Alig confidence 















.






















.






































Template Conservation 

 

 
 
   
  
 

  






 
    
             
 
   
                         
Template Sequence  PRIYQEVIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGE
Template Known Secondary structure 

GGGS


TTS
S
S

SSB
S
GGG
S
Template Predicted Secondary structure 


































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   161........170. ........180.........190.........200.........210..
Predicted Secondary structure 

.














Query SS confidence 










.








































Query Sequence  MPAPAKREAYA. ADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVD
Query Conservation      


  
 . 






 
 








       


    






Alig confidence 










.










.......






















Template Conservation                
       
.......                




 
Template Sequence  KSPEERSKAWARAKVIVATPQTI. . . . . . . ENDLLAGRISLEDVSLIVFDEAH
Template Known Secondary structure  S

S
.......TTS

TTS
STGG
Template Predicted Secondary structure 






.......









Template SS confidence 




















































   90.........100.........110.. .......120.........130.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions