Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence99.12%DateThu Jan 5 11:32:13 GMT 2012
Rank66Aligned Residues133
% Identity20%Templated1hv8a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   426...430.........440.........450.........460.........470.........480.........490........ .500...
Predicted Secondary structure 




















..
Query SS confidence 








































































. .




Query Sequence  LVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPA. . AVTIA
Query Conservation   
  
   
  

  

      







 


 

 

  
   

 
 




    





 

  
..




Alig confidence 

















...



















































..




Template Conservation          

  
   
 ...      


             
                         
       

 
Template Sequence  YVEVNENERFEALCRLLK. . . NKEFYGLVFCKTKRDTKELASXLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKIRILIA
Template Known Secondary structure 

GGG
...STT


SSTT


SSS
TTSSS
Template Predicted Secondary structure 
...
























Template SS confidence 















































































   218.220.........230..... ....240.........250.........260.........270.........280.........290....
 
   504.....510.........520.........530.........540.........550.........560.........570.........580...
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  TNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGS
Query Conservation 














                             
   
















 













Alig confidence 











.....................................






























Template Conservation 
     


   .....................................
  

  
 
       

 

  
 
  
 
Template Sequence  TDVXSRGIDVND. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LNCVINYHLPQNPESYXHRIGRTGRAGKKGK
Template Known Secondary structure 
TT


S
.....................................
SSS

S
STTT

SSS

Template Predicted Secondary structure 







.....................................




















Template SS confidence 















































































   295....300...... ...310.........320.........330.......
 
   584.....590........
Predicted Secondary structure 

Query SS confidence 














Query Sequence  SRFYLSMEDALMRIF
Query Conservation 
 
 






 
 
Alig confidence 














Template Conservation     
    
      
Template Sequence  AISIINRREYKKLRY
Template Known Secondary structure 
TTS
Template Predicted Secondary structure 
Template SS confidence 














   338.340.........350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions