Job Description P10408 Confidence 28.83% Date Thu Jan 5 11:32:13 GMT 2012 Rank 317 Aligned Residues 68 % Identity 15% Template c3tekA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:thermodbp-single stranded dna binding protein; PDBTitle: thermodbp: a non-canonical single-stranded dna binding protein with a2 novel structure and mechanism Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	H	D	A	V	L	E	A	G	G	L	H	I	I	G	T	E	R	H	E	S	R	R	I	D	N	Q	L	R	G	R	S	G	R	Q	G	D	A	G	S	S	R	F	Y	L	S	M	E	D	A	L	M	R	I	F	A	S	D	R	V	S	G	M	M	R	K	L	G	M	K	P	G	E	A	I	E	H	P	W
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		E	V	R	S	E	L	I	T	K	G	E	K	K	L	V	L	I	R	W	N	T	G	K	T	S	A	G	R	L	F	G	R	Y	G	P	G	G	R	P	.	.	.	.	.	.	.	.	.	.	.	E	F	F	K	L	L	F	G	A	V	A	G	S	L	R	E	Q	F	G	.	P	D	G	E	N	I	F	N	R	I
Template Known Secondary structure											T	T												S	B							S	S	S	B	T	T	T	B		.	.	.	.	.	.	.	.	.	.	.	T																		T	.	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50												.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions