Job Description P10408 Confidence 22.90% Date Thu Jan 5 11:32:13 GMT 2012 Rank 361 Aligned Residues 137 % Identity 14% Template c3lrmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase 1; PDBTitle: structure of alfa-galactosidase from saccharomyces cerevisiae with2 raffinose Resolution 2.70 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																																			.														.	.	.	.	.	.
Query SS confidence																																																			.														.	.	.	.	.	.
Query Sequence		L	Y	S	P	A	N	I	M	L	M	H	H	V	T	A	A	L	R	A	H	A	L	F	T	R	D	V	D	Y	I	V	K	D	G	E	V	I	I	V	D	E	H	T	G	R	T	M	Q	G	.	R	R	W	S	D	G	L	H	Q	A	V	E	A	.	.	.	.	.	.	K	E	G	V	Q	I	Q	N	E	N	Q
Query Conservation																																																			.														.	.	.	.	.	.
Alig confidence																																																			.														.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	C	D	V	S	E	Q	L	L	L	D	T	A	D	R	I	S	D	L	G	L	K	D	M	G	Y	K	Y	I	I	L	D	D	C	W	S	S	G	R	D	S	D	G	F	L	V	A	D	E	Q	K	F	P	N	G	M	G	H	V	A	D	H	L	H	N	N	S	F	L	F	G	M	Y	S	S	A	G	E	Y
Template Known Secondary structure			T	T																	T	T		G	G	G	T								S	S							T	T	S						T	T	T		T	T												T	T									S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	S	I	T	F	Q	N	Y	F	R	L	Y	E	K	L	A	G	M	T	G	T	A	D	T	E	A	F	E	F	S	S	I	Y	K	L	D	T	V	V	V	P	T	N	R	P	M	I	R	K	D	L	P	D	L	V	Y	M	T	E	A	E	K	I	Q	A	I	I	E	D	I	K	E	R	T	A	K	G	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.	.	.	.	.
Template Sequence		T	C	A	G	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	G	S	L	G	R	E	E	E	D	A	Q	F	F	A	N	.	N	R	V	D	Y	L	K	Y	A	N	C	.	.	.	.	.	.	.	Y	N	K	G	Q	F	G	T	P	E	I	S	Y	H	R	Y	K	A	M	S	D	A	L	N	K	T	G	R
Template Known Secondary structure			T	T	S	S	B	.	.	.	.	.	.	.	.	.	.	.	.			T	T												.	T	T									T	.	.	.	.	.	.	.	T		T	T			S	S																		T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																.												.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.													.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		451	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	F	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions