Job Description P10408 Confidence 96.84% Date Thu Jan 5 11:32:13 GMT 2012 Rank 139 Aligned Residues 151 % Identity 18% Template c3llmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase Resolution 2.80 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	E	F	R	A	R	L	E	K	G	E	V	L	E	N	L	I	P	E	A	F	A	V	V	R	E	A	S	K	R	V	F	G	M	R	H	F	D	V	Q	L	L	G	G	M	V	L	N	E	R	C	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	L	P	A	Y	L	N	A	L	T	G	K	G	.	.
Query Conservation																																																																																.	.
Alig confidence																												.																																																				.	.
Template Conservation																												.
Template Sequence		E	Q	I	S	X	D	L	K	N	E	L	X	Y	Q	L	E	Q	D	H	D	L	Q	A	I	L	Q	.	E	R	E	L	L	P	V	K	K	F	E	S	E	I	L	E	A	I	S	Q	N	S	V	V	I	I	R	G	A	T	G	C	G	K	T	T	Q	V	P	Q	F	I	L	D	D	F	I	Q	N	D	R	A	A
Template Known Secondary structure																												.				T	S	G	G	G	G	G												S								T	T	S	S																T	T		G	G
Template Predicted Secondary structure																												.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
					126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.																			.
Query SS confidence		.	.	.																			.
Query Sequence		.	.	.	V	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N	.	R	P	L	F	E	F	L	G	L	T	V	G	I	N	L	P	G	M	P	A	P	A	K	R	E	A	Y	A	A	D	I	T	Y	G	T	N	N	E	Y	G	F	D	Y	L	R	D	N	M	A	F	S	P	E	E	R	V	Q	R
Query Conservation		.	.	.																			.
Alig confidence		.	.	.																			.																											.	.	.								.	.	.	.	.											.	.	.	.	.
Template Conservation																																																		.	.	.								.	.	.	.	.											.	.	.	.	.
Template Sequence		E	C	N	I	V	V	T	Q	P	R	R	I	S	A	V	S	V	A	E	R	V	A	F	E	R	G	E	E	P	G	K	S	C	G	Y	S	V	R	F	E	S	I	L	P	R	P	H	A	.	.	.	S	I	X	F	C	T	V	.	.	.	.	.	G	V	L	L	R	K	L	E	A	G	.	.	.	.	.	I	R
Template Known Secondary structure		G								S	S														T	T	T			T	T	S	S						T	T							S	S	S	.	.	.								.	.	.	.	.											.	.	.	.	.		T
Template Predicted Secondary structure																																																		.	.	.								.	.	.	.	.											.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.				.	.	.	.	.	490	.						.	.	.	.	.	.	.	.	500	.						.	.
		202	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	H	Y	A	L	V	D	E	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S	H	V	I	V	D	E	I	H
Template Known Secondary structure		T									T	T
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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