Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence97.37%DateThu Jan 5 11:32:13 GMT 2012
Rank132Aligned Residues144
% Identity15%Templatec3fmpD_
PDB info PDB header:oncoprotein/hydrolaseChain: D: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19
Resolution3.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VREASKRVFGMRHFDVQLLGGMVL. . NERC. . IAEMRTGEGKTLTATLPAYLNALTGKGV. . . HVVTVNDYLAQRDAENN
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Template Sequence  LLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVI
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   144.....150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  RPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEAR
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Template Sequence  EQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVL. . . . . . DWCSKLKFIDPKKIKVFVLDEADVMIATQGH
Template Known Secondary structure  TTSTT

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   183......190.........200.........210.........220.. .......230.........240.........250...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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