Job Description P10408 Confidence 97.64% Date Thu Jan 5 11:32:13 GMT 2012 Rank 124 Aligned Residues 139 % Identity 16% Template c3fmoB_ PDB info PDB header:oncoprotein/hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19 Resolution 2.51 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																												.	.			.	.																							.	.	.
Query SS confidence																												.	.			.	.																							.	.	.
Query Sequence		V	R	E	A	S	K	R	V	F	G	M	R	H	F	D	V	Q	L	L	G	G	M	V	L	N	E	.	.	R	C	.	.	I	A	E	M	R	T	G	E	G	K	T	L	T	A	T	L	P	A	Y	L	N	A	.	.	.	L	T	G	K	G	V	H	V	V	T	V	N	D	Y	L	A	Q	R	D	A	E	N	N
Query Conservation																												.	.			.	.																							.	.	.
Alig confidence																												.	.			.	.																							.	.	.
Template Conservation
Template Sequence		L	L	Q	G	V	Y	A	M	G	F	N	R	P	S	K	I	Q	E	N	A	L	P	L	M	L	A	E	P	P	Q	N	L	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	V	L	A	M	L	S	Q	V	E	P	A	N	K	Y	P	Q	C	L	C	L	S	P	T	Y	E	L	A	L	Q	T	G	K	V	I
Template Known Secondary structure									T	T			S													T	S	S	S										T	T	S	S															T	T	S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	F	E	F	L	G	L	T	V	G	I	N	L	P	G	M	P	A	P	A	K	R	E	A	Y	A	A	D	I	T	Y	G	T	N	N	E	Y	G	F	D	Y	L	R	D	N	M	A	F	S	P	E	E	R	V	Q	R	K	L	H	Y	A	L	V	D	E	V	D	S	I	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		E	Q	M	G	K	F	Y	P	E	L	K	L	A	Y	A	V	R	G	N	K	L	E	R	G	Q	K	I	S	E	Q	I	V	I	G	T	P	G	T	V	L	.	.	.	.	.	.	D	W	C	S	K	L	K	F	I	D	P	K	K	I	K	V	F	V	L	D	E	A	D	V	M	I
Template Known Secondary structure					T	T	T	S	T	T							S	T	T					T	T						S											.	.	.	.	.	.				T	T	T					G	G	G		S					T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions