Job Description P10408 Confidence 87.00% Date Thu Jan 5 11:32:13 GMT 2012 Rank 162 Aligned Residues 69 % Identity 17% Template c3eplA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:trna isopentenyltransferase; PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		387	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.												.	.	.	.	.	.	.											.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure													.															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence													.															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	T	G	T	A	D	T	E	.	A	F	E	F	S	S	I	Y	K	L	D	T	V	V	.	.	.	.	.	.	.	.	.	.	.	V	P	T	N	R	P	M	.	.	.	.	.	.	.	.	.	.	I	R	K	D	L	P	D	L	V	Y	M	T	E	A	E	K	I	Q	A	I	I	E	D	I	K	E
Query Conservation													.															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence													.															.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	T	T	G	V	G	K	S	Q	L	S	I	Q	L	A	Q	K	F	N	G	E	V	I	N	S	D	S	M	Q	V	Y	K	D	I	P	I	I	T	N	K	H	P	L	Q	E	R	E	G	I	P	H	H	V	M	N	H	V	D	W	S	E	E	Y	Y	S	H	R	F	E	T	E	C	M	N	A	I	E	D
Template Known Secondary structure						S	S	S													T	T		B						T	T	T	S	S	S	S										G	G	G	G	T	T					S		S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		445	.	.	.	.	450		.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	T	A	K	G	Q	.	P	V	L	V	G
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		I	H	R	R	G	K	I	P	I	V	V	G
Template Known Secondary structure				T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions