Job Description P10408 Confidence 93.43% Date Thu Jan 5 11:32:13 GMT 2012 Rank 149 Aligned Residues 68 % Identity 31% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		387	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.												.	.	.	.	.	.	.	420												.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure												.																	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	G	M	T	G	T	A	D	T	.	E	A	F	E	F	S	S	I	Y	K	L	D	T	V	V	V	.	.	.	.	.	.	.	.	.	.	.	P	T	N	R	P	M	I	R	.	.	.	.	.	.	.	.	.	.	.	K	D	L	P	D	L	V	Y	M	T	E	A	E	K	I	Q	A	I	I	E	D	I	K
Query Conservation												.																	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																																																			.
Template Sequence		L	M	G	P	T	A	A	G	K	T	D	L	A	M	A	L	A	D	A	L	P	C	E	L	I	S	V	D	S	A	L	I	Y	R	G	M	D	I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y	.	S	A	A	E	F	R	A	D	A	L	A	A	M	A
Template Known Secondary structure					S	T	T	S	S										T	T	S									T	T	T	T	B	T	T			T	T	T	T										S				S	S	S		B		T	T	S			.
Template Predicted Secondary structure																																																																			.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.
		444	.	.	.	.	.	450		.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	R	T	A	K	G	Q	.	P	V	L	V	G
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		K	A	T	A	R	G	R	I	P	L	L	V	G
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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