Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence90.98%DateThu Jan 5 11:32:13 GMT 2012
Rank154Aligned Residues69
% Identity30%Templatec3a8tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate isopentenyltransferase; PDBTitle: plant adenylate isopentenyltransferase in complex with atp
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   387..390...... ...400.........410 .........420... ......430.........440...
Predicted Secondary structure 



.


...........










...........


Query SS confidence 









.













. . . . . . . . . . .












. . . . . . . . . . .



















Query Sequence  LAGMTGTADT. EAFEFSSIYKLDTV. . . . . . . . . . . VVPTNRPMIRKDL. . . . . . . . . . . PDLVYMTEAEKIQAIIEDIK
Query Conservation 
 





 
.
  

  

 
 

........... 





  
 
 ........... 
 
  
   
  

  

 
Alig confidence 









.













...........












...........



















Template Conservation 
 







 

  

     






 













  
   






   
     

  
   
   
 
Template Sequence  LMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSLAGKAVS
Template Known Secondary structure 
STTSSTTS


SSTTBSS
TTTTT


SGGGTT

SSS
B
GGG



Template Predicted Secondary structure 
































Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   444.....450 .....
Predicted Secondary structure 


.
Query SS confidence 






.




Query Sequence  ERTAKGQ. PVLVG
Query Conservation       

.




Alig confidence 






.




Template Conservation   
   
  




Template Sequence  EITGRRKLPVLVG
Template Known Secondary structure  TT

Template Predicted Secondary structure 




Template SS confidence 












   115....120.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions