Return to main results Retrieve Phyre Job Id

Job DescriptionP10408
Confidence28.91%DateThu Jan 5 11:32:13 GMT 2012
Rank315Aligned Residues10
% Identity60%Templatec3a44D_
PDB info PDB header:metal binding proteinChain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form
Resolution3.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   881... .. ...890
Predicted Secondary structure 



.............

.



Query SS confidence 



. . . . . . . . . . . . .

.



Query Sequence  RNDP. . . . . . . . . . . . . CP. CGSG
Query Conservation 



.............

.



Alig confidence 



.............

.



Template Conservation                   

 


 
Template Sequence  VKDKFDERIEVVHAFLACPKCGSH
Template Known Secondary structure  TT

TTGGG
S
SSSS

Template Predicted Secondary structure 






















Template SS confidence 























   85....90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions